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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: Q96AT9




USC-OGP 2-DE database:  Q96AT9


Q96AT9


General information about the entry
View entry in simple text format
Entry nameRPE_HUMAN
Primary accession numberQ96AT9
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; AltName: Full=Ribulose-5-phosphate-3-epimerase;.
Gene nameName=RPE
ORFNames=HUSSY-17
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=5.27; Mw=23825

Cross-references
UniProtKB/Swiss-ProtQ96AT9; RPE_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameRPE_HUMAN
Primary accession numberQ96AT9
Secondary accession number(s) A8K4S0 B4E016 C9JPQ7 O43767 Q53TV9 Q8N215 Q96N34 Q9BSB5
Sequence was last modified on December 1, 2001 (version 1)
Annotations were last modified on March 15, 2017 (version 144)
Name and origin of the protein
DescriptionRecName: Full=Ribulose-phosphate 3-epimerase; EC=5.1.3.1; AltName: Full=Ribulose-5-phosphate-3-epimerase;
Gene nameName=RPE
ORFNames=HUSSY-17
Encoded onName=RPE; ORFNames=HUSSY-17
Keywords3D-structure; Acetylation; Alternative splicing; Carbohydrate metabolism; Cobalt; Complete proteome; Iron; Isomerase; Manganese; Metal-binding; Reference proteome; Zinc.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAK056028; BAB71076.1; ALT_FRAME; mRNA
EMBLAK093658; BAC04212.1; ALT_FRAME; mRNA
EMBLAK291035; BAF83724.1; -; mRNA
EMBLAK303184; BAG64278.1; -; mRNA
EMBLAC007038; AAX93087.1; -; Genomic_DNA
EMBLCH471063; EAW70473.1; -; Genomic_DNA
EMBLCH471063; EAW70474.1; -; Genomic_DNA
EMBLBC005148; AAH05148.2; -; mRNA
EMBLBC016764; AAH16764.1; -; mRNA
EMBLBC072401; AAH72401.1; -; mRNA
EMBLAJ224326; CAA11895.1; -; mRNA
CCDSCCDS2388.1; -. [Q96AT9-1]; .
CCDSCCDS42810.1; -. [Q96AT9-3]; .
CCDSCCDS63107.1; -. [Q96AT9-4]; .
CCDSCCDS63108.1; -. [Q96AT9-5]; .
RefSeqNP_001265211.1; NM_001278282.1. [Q96AT9-3]; .
RefSeqNP_001265212.1; NM_001278283.1. [Q96AT9-3]; .
RefSeqNP_001265214.1; NM_001278285.1. [Q96AT9-4]; .
RefSeqNP_001265215.1; NM_001278286.1. [Q96AT9-5]; .
RefSeqNP_001265217.1; NM_001278288.1. [Q96AT9-5]; .
RefSeqNP_001265218.1; NM_001278289.1; .
RefSeqNP_001305855.1; NM_001318926.1; .
RefSeqNP_001305856.1; NM_001318927.1; .
RefSeqNP_001305857.1; NM_001318928.1; .
RefSeqNP_001305858.1; NM_001318929.1; .
RefSeqNP_001305859.1; NM_001318930.1. [Q96AT9-5]; .
RefSeqNP_001305860.1; NM_001318931.1. [Q96AT9-5]; .
RefSeqNP_008847.1; NM_006916.2. [Q96AT9-3]; .
RefSeqNP_954699.1; NM_199229.2. [Q96AT9-1]; .
RefSeqXP_006712740.1; XM_006712677.3. [Q96AT9-5]; .
UniGeneHs.282260; -; .
UniGeneHs.591638; -; .
UniGeneHs.734255; -; .
PDB3OVP; X-ray; 1.70 A; A/B=1-228
PDB3OVQ; X-ray; 2.00 A; A/B=1-228
PDB3OVR; X-ray; 1.95 A; A/B=1-228
PDB3QC3; X-ray; 2.20 A; A/B=1-224
PDBsum3OVP; -; .
PDBsum3OVQ; -; .
PDBsum3OVR; -; .
PDBsum3QC3; -; .
ProteinModelPortalQ96AT9; -; .
SMRQ96AT9; -; .
BioGrid112040; 50; .
IntActQ96AT9; 3; .
MINTMINT-1448309; -; .
STRING9606.ENSP00000352401; -; .
iPTMnetQ96AT9; -; .
PhosphoSitePlusQ96AT9; -; .
DMDM34924986; -; .
EPDQ96AT9; -; .
MaxQBQ96AT9; -; .
PaxDbQ96AT9; -; .
PeptideAtlasQ96AT9; -; .
PRIDEQ96AT9; -; .
TopDownProteomicsQ96AT9-1; -. [Q96AT9-1]; .
TopDownProteomicsQ96AT9-2; -. [Q96AT9-2]; .
DNASU6120; -; .
EnsemblENST00000354506; ENSP00000346501; ENSG00000197713. [Q96AT9-4]; .
EnsemblENST00000359429; ENSP00000352401; ENSG00000197713. [Q96AT9-1]; .
EnsemblENST00000411934; ENSP00000389411; ENSG00000197713. [Q96AT9-5]; .
EnsemblENST00000429921; ENSP00000401838; ENSG00000197713. [Q96AT9-3]; .
EnsemblENST00000436630; ENSP00000403808; ENSG00000197713. [Q96AT9-3]; .
EnsemblENST00000438204; ENSP00000402061; ENSG00000197713. [Q96AT9-5]; .
EnsemblENST00000454822; ENSP00000394455; ENSG00000197713. [Q96AT9-3]; .
GeneID6120; -; .
KEGGhsa:6120; -; .
UCSCuc002vdn.5; human. [Q96AT9-1]; .
CTD6120; -; .
DisGeNET6120; -; .
GeneCardsRPE; -; .
H-InvDBHIX0190555; -; .
HGNCHGNC:10293; RPE; .
HPAHPA036498; -; .
HPAHPA036499; -; .
MIM180480; gene; .
neXtProtNX_Q96AT9; -; .
OpenTargetsENSG00000197713; -; .
PharmGKBPA34654; -; .
eggNOGKOG3111; Eukaryota; .
eggNOGCOG0036; LUCA; .
GeneTreeENSGT00390000001447; -; .
HOGENOMHOG000259349; -; .
HOVERGENHBG044821; -; .
InParanoidQ96AT9; -; .
KOK01783; -; .
OMAKTIDVCA; -; .
OrthoDBEOG091G0JMQ; -; .
PhylomeDBQ96AT9; -; .
TreeFamTF300157; -; .
BRENDA5.1.3.1; 2681; .
ReactomeR-HSA-71336; Pentose phosphate pathway (hexose monophosphate shunt); .
EvolutionaryTraceQ96AT9; -; .
GeneWikiRPE_(gene); -; .
GenomeRNAi6120; -; .
PROPR:Q96AT9; -; .
ProteomesUP000005640; Chromosome 2; .
BgeeENSG00000197713; -; .
CleanExHS_RPE; -; .
ExpressionAtlasQ96AT9; baseline and differential; .
GenevisibleQ96AT9; HS; .
GOGO:0005829; C:cytosol; IBA:GO_Central; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0042802; F:identical protein binding; IPI:IntAct; .
GOGO:0046872; F:metal ion binding; IDA:UniProtKB; .
GOGO:0042803; F:protein homodimerization activity; IPI:UniProtKB; .
GOGO:0004750; F:ribulose-phosphate 3-epimerase activity; IDA:UniProtKB; .
GOGO:0005975; P:carbohydrate metabolic process; IDA:UniProtKB; .
GOGO:0044262; P:cellular carbohydrate metabolic process; IBA:GO_Central; .
GOGO:0019323; P:pentose catabolic process; IBA:GO_Central; .
GOGO:0006098; P:pentose-phosphate shunt; IDA:UniProtKB; .
GOGO:0009052; P:pentose-phosphate shunt; non-oxidative branch; IBA:GO_Central
CDDcd00429; RPE; 1; .
Gene3D3.20.20.70; -; 1; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR026019; Ribul_P_3_epim; .
InterProIPR000056; Ribul_P_3_epim-like; .
InterProIPR011060; RibuloseP-bd_barrel; .
PANTHERPTHR11749; PTHR11749; 1; .
PfamPF00834; Ribul_P_3_epim; 1; .
PIRSFPIRSF001461; RPE; 1; .
SUPFAMSSF51366; SSF51366; 1; .
TIGRFAMsTIGR01163; rpe; 1; .
PROSITEPS01085; RIBUL_P_3_EPIMER_1; 1; .
PROSITEPS01086; RIBUL_P_3_EPIMER_2; 1; .



USC-OGP 2-DE database image


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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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